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 Ontologies







A Data Analysis The LoRA Dataset Project page:https: //lora-vqa.github.io/

Neural Information Processing Systems

Each question and answer group has a unique list of corresponding visuals used for image creation. The list of visible objects, which combines the correct-answer objects with an arbitrary'noise' object



Ontology Neural Networks for Topologically Conditioned Constraint Satisfaction

Oh, Jaehong

arXiv.org Machine Learning

Abstract--Neuro-symbolic reasoning systems face fundamental challenges in maintaining semantic coherence while satisfying physical and logical constraints. Building upon our previous work on Ontology Neural Networks, we present an enhanced framework that integrates topological conditioning with gradient stabilization mechanisms. The approach employs Forman-Ricci curvature to capture graph topology, Deep Delta Learning for stable rank-one perturbations during constraint projection, and Covariance Matrix Adaptation Evolution Strategy for parameter optimization. Experimental evaluation across multiple problem sizes demonstrates that the method achieves mean energy reduction to 1.15 compared to baseline values of 11.68, with 95 percent success rate in constraint satisfaction tasks. The framework exhibits seed-independent convergence and graceful scaling behavior up to twenty-node problems, suggesting that topological structure can inform gradient-based optimization without sacrificing interpretability or computational efficiency. Integrating symbolic reasoning with neural learning remains a central challenge in artificial intelligence. While neural networks excel at pattern recognition and gradient-based optimization, they often struggle to maintain explicit constraints or provide interpretable intermediate representations. The opacity of deep neural representations makes it difficult to verify whether learned policies respect domain knowledge or physical laws. Conversely, symbolic systems offer logical transparency and formal guarantees but lack the flexibility to learn from noisy, incomplete data or adapt to distributional shifts.


SM3-Text-to-Query: Synthetic Multi-Model Medical Text-to-Query Benchmark

Neural Information Processing Systems

Electronic health records (EHRs) are stored in various database systems with different database models on heterogeneous storage architectures, such as relational databases, document stores, or graph databases. These different database models have a big impact on query complexity and performance. While this has been a known fact in database research, its implications for the growing number of Text-to-Query systems have surprisingly not been investigated so far.In this paper, we present SM3-Text-to-Query, the first multi-model medical Text-to-Query benchmark based on synthetic patient data from Synthea, following the SNOMED-CT taxonomy---a widely used knowledge graph ontology covering medical terminology. SM3-Text-to-Query provides data representations for relational databases (PostgreSQL), document stores (MongoDB), and graph databases (Neo4j and GraphDB (RDF)), allowing the evaluation across four popular query languages, namely SQL, MQL, Cypher, and SPARQL.We systematically and manually develop 408 template questions, which we augment to construct a benchmark of 10K diverse natural language question/query pairs for these four query languages (40K pairs overall). On our dataset, we evaluate several common in-context-learning (ICL) approaches for a set of representative closed and open-source LLMs.Our evaluation sheds light on the trade-offs between database models and query languages for different ICL strategies and LLMs. Last,SM3-Text-to-Query is easily extendable to additional query languages or real, standard-based patient databases.


End-to-End Ontology Learning with Large Language Models

Neural Information Processing Systems

Ontologies are useful for automatic machine processing of domain knowledge as they represent it in a structured format. Yet, constructing ontologies requires substantial manual effort. To automate part of this process, large language models (LLMs) have been applied to solve various subtasks of ontology learning. However, this partial ontology learning does not capture the interactions between subtasks. We address this gap by introducing OLLM, a general and scalable method for building the taxonomic backbone of an ontology from scratch.